R

StateoftheR is a network of researchers and engineers from the MathNum department who meet to deepen their know-how, improve the dissemination of their statistical methods and exchange on the latest innovations of R and RStudio.

R Packages

available on the CRAN and for some of them on GitHub.

  • anapuce: Tools for microarray data analysis.

  • MixThres: mixture model of truncated gaussians to detect a hybridization threshold for microarray data.

  • CHMM: An exact and a variational inference for Coupled Hidden Markov Models applied to the joint detection of copy number variations.

  • cobiclust: Biclustering via Latent Block Model Adapted to Overdispersed Count Data.

    cobiclust: Erysiphe alphitoides pathobiome tutorial

Other packages developed in the SOLsTIS team